Showing posts with label Research. Show all posts
Showing posts with label Research. Show all posts

Monday, October 28, 2013

'Dark universe' beckons as research target after Higgs boson wins Nobel

British physicist Peter Higgs (R) shakes hands with Belgium physicist Francois Englert before a scientific seminar to deliver the latest update in the search for the Higgs boson at the European Organization for Nuclear Research (CERN) in Meyrin near Geneva July 4, 2012. REUTERS/Denis Balibouse

British physicist Peter Higgs (R) shakes hands with Belgium physicist Francois Englert before a scientific seminar to deliver the latest update in the search for the Higgs boson at the European Organization for Nuclear Research (CERN) in Meyrin near Geneva July 4, 2012.

Credit: Reuters/Denis Balibouse

By Robert Evans

GENEVA | Tue Oct 8, 2013 2:54pm EDT

GENEVA (Reuters) - With the Higgs boson in the bag, the head of the CERN research center urged scientists on Tuesday to push on to unveil the "dark universe" - the hidden stuff that makes up 95 per cent of the cosmos and is still a mystery to earthbound researchers.

Rolf Heuer spoke after the Nobel physics prize went to Briton Peter Higgs and Belgian Francois Englert for predicting the existence of the Higgs boson particle, which explains how fundamental matter got the mass to form stars and planets.

"We have now completed the Standard Model," Heuer told reporters, referring to the portrait of the known universe drafted in the 1980s.

"It is high time for us to go on to the dark universe," added the director general of the world's main institution focusing on the basic particles of nature, based near Geneva.

The Higgs boson and its associated force field were among the last major building blocks of that model of how the cosmos works.

Their existence was confirmed, after three decades, when the particle was seen last year in CERN's underground particle smasher, the giant Large Hadron Collider (LHC).

The LHC, now in the middle of a two-year refit and upgrade, is due to resume operations in early 2015 with its power doubled.

"That will open promising territory into new physics," Heuer's deputy Sergio Bertolucci said. New physics is the term used by scientists for the realms beyond the Standard Model that currently remain as elusive as science-fiction.

SUPER-SYMMETRY EYED

First among these - highlighted in Nobel acceptance comments by Englert - is super-symmetry, the theory that all basic particles have a heavier but invisible partner, which is linked to concepts like string theory and extra dimensions.

No sign of super-symmetry has yet appeared in CERN's collider, leading some science writers to voice doubts about the concept.

But Heuer said that just because it was elusive did not mean it did not exist. "It took us 30 years to find the Higgs," he added.

The LHC, in its 27-kilometre (17-mile) circular tunnel under a corner of Switzerland and France, was conceived in the early 1990s at a time when particle physicists, astrophysicists and cosmologists were increasingly talking together.

The interchange between experts in once separate fields has brought theories about the universe and its nature - as well as what came before and whether there are parallel undetected worlds - into sharper focus.

This has also been fueled by the increasing power of telescopes, allowing scientists to detect indirectly that there must be some strange substance massing around the galaxies to keep them together. This has become known as dark matter because it cannot be seen, although its effects are evident.

Recent measurements by the European Space Agency's satellite-borne Planck telescope found dark matter accounted for 27 percent of the universe and the even more enigmatic dark energy - driving galaxies apart - 68.3 percent.

Visible matter in open space - galaxies, stars and planets - accounts for just 5 percent.

String theory says particles are in fact tiny oscillating strings that can appear differently depending on how they are viewed. It requires multiple extra dimensions that have yet to be detected.

The theory, which has partly morphed into the M-theory espoused by British scientist Stephen Hawking, has fierce critics. It also allows for parallel universes - a multiverse where universes spring into existence and die spontaneously.

"But proving that," says CERN theoretician James Wells, "won't come in our lifetime."

(Editing by Andrew Heavens)


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Friday, October 25, 2013

Nominations sought for prestigious research award

Nominations sought for prestigious research award | News & Press Center Skip to main content #header { background-image: url("http://www.ala.org/news/sites/ala.org.news/files/ala-header-long.png"); } ALA User Menu My AccountALAALA ConnectContact ALAGiveALAJoin/RenewLogin Search form Search ala homepage quick links CommitteesALA & Council CommitteesDivision CommitteesJoint CommitteesRound Table CommitteesSpecial CommitteesVolunteer FormsDivisionsAmerican Association of School Librarians (AASL)Assn. for Library Collections & Technical Services (ALCTS)Assn. for Library Service to Children (ALSC)Assn. of College & Research Libraries (ACRL)Assn. of Specialized & Cooperative Library Agencies (ASCLA)Library & Information Technology Assn. (LITA)Library Leadership & Management Assn. (LLAMA)Public Library Assn. (PLA)Reference & User Services Assn. (RUSA)United for LibrariesYoung Adult Library Services Assn. (YALSA)OfficesChapter Relations Office (CRO)Conference ServicesDevelopmentFinance & AccountingGovernanceHuman ResourcesInformation Technology & Telecommunication Services (ITTS)International Relations Office (IRO)LibraryMember & Customer Service (MACS)Membership DevelopmentOffice for AccreditationOffice for DiversityOffice for Human Resource Development and Recruitment (HRDR)Office for Information Technology Policy (OITP)Office for Intellectual Freedom (OIF)Office for Library Advocacy (OLA)Office for Literacy & Outreach (OLOS)Office for Research & Statistics (ORS)Office of Government Relations (OGR)Public Information Office (PIO)Public Programs Office (PPO)PublishingStaff Support ServicesWashington Office (WO)Round TablesEthnic & Multicultural (EMIERT)Exhibits (ERT)Federal & Armed Forces Libraries (FAFLRT)Games & Gaming (GameRT)Gay, Lesbian, Bisexual & Transgender (GLBTRT)Government Documents (GODORT)Intellectual Freedom (IFRT)International Relations (IRRT)Learning (LearnRT)Library History (LHRT)Library Instruction (LIRT)Library Research (LRRT)Library Support Staff Interests (LSSIRT)Map & Geospatial Information (MAGIRT)New Members (NMRT)Retired Members Round Table (RMRT)Social Responsibilities (SRRT)Staff Organizations (SORT)Sustainability (SustainRT)Video (VRT)PublicationsALA Award & Notable SealsALA Mail List RentalALA StoreAmerican Libraries MagazineBooklistSubscription Order FormRelated@ your libraryALA-Allied Professional AssociationAmerican Libraries Buyers GuideDonate (giveALA)Freedom to Read FoundationI Love LibrariesLegislative Action CenterLibraryCareers.orgMerritt Humanitarian FundProgramming LibrarianRead Write Connect Right Nav Contact CongressFeedback You are at: ALA.org  » NEWS  » Nominations sought for prestigious research award !Left Navigation: News & Press Center ALA Press ReleasesPress CenterPress Credential GuidelinesPress KitsState of America's Libraries Report 2013State of America's Library Report ArchiveSubmit News Items to ALAOp-edsRecent Media Coverage Share this page:Share on FacebookShare on TwitterShare on StumbleUponShare on RedditShare on DiggShare on LinkedInShare on Google+Share on PinterestShare on TumblrMore Options Send via email  Print  Cite  Nominations sought for prestigious research award  Subscribe

For Immediate Release
Mon, 10/21/2013

Contact: Mary Taylor Executive Director Library Information Technology Association (LITA) 312-280-4267 mtaylor@ala.org

CHICAGO — Nominations are invited for the 2014 Frederick G. Kilgour Award for Research in Library and Information Technology, sponsored by OCLC, Inc. and the Library and Information Technology Association (LITA), a division of the American Library Association (ALA).  The deadline for nominations is December 31, 2013.


The Kilgour Research Award recognizes research relevant to the development of information technologies, in particular research which shows promise of having a positive and substantive impact on any aspect of the publication, storage, retrieval and dissemination of information or how information and data are manipulated and managed.  The Kilgour award consists of $2,000 cash, an award citation and an expense paid trip (airfare and two nights lodging) to the ALA Annual Conference.


Nominations will be accepted from any member of the American Library Association.  Nominating letters must address how the research is relevant to libraries; is creative in its design or methodology; builds on existing research or enhances potential for future exploration; and/or solves an important current problem in the delivery of information resources.  A curriculum vita and a copy of several seminal publications by the nominee must be included.  Preference will be given to completed research over work in progress. More information and a list of previous winners can be found at www.lita.org.


Currently-serving officers and elected officials of LITA, members of the Kilgour Award Committee and OCLC employees and their immediate family members are ineligible.


The 2014 Frederick G. Kilgour Award Committee includes Erik Mitchell, chair, Brett Bonfield, past-chair, Rebecca Mugridge, and Kebede Wordofa, members, and, Roy Tennant, OCLC liaison. More information about the Committee is available at http://www.ala.org/lita/involve/committees/kilgour/lit-awoclckil .


            The following distinguished people have received the award to date:

Karen Markey Drabenstott, University of Michigan, Ann Arbor, Mich., 1998Dean K. Jue, Florida State University, Tallahassee, Fla., 1999Gary Marchionini, University of North Carolina, Chapel Hill, N.C., 2000Marcia Bates, University of California, Los Angeles, Calif., 2001Carol C. Kuhlthau, Rutgers University, Piscataway, N.J., 2002Herbert Van de Sompel, Los Alamos National Laboratories, Los Alamos, N.M., 2003Carl Lagoze, Cornell University, Ithaca, N.Y., 2004William E. Moen, University of North Texas , Denton, Texas, 2005Ching-chih Chen, Simmons College, Boston, 2006Richard Pearce-Moses, Arizona State Library, 2007Dr. Jane Greenberg, University of North Carolina-Chapel Hill, 2008William H. Mischo, University of Illinois, Urbana-Champaign, 2009Dr. John Willinsky, Stanford University, 2010Daniel J. Cohen, George Mason University, 2011G Sayeed Choudhury, Johns Hopkins University, 2012Barbara Tillett, Library of Congress, 2013

More information about the Award is available at http://www.ala.org/lita/awards/kilgour.


Send nominations by Dec. 31, 2013, to the Award jury chair: Erik Mitchell, 255 Doe Library, MC 6000, Berkeley, CA 94720-6000 or emitchell@berkeley.edu . 


The  Kilgour Research Award will be presented at the LITA President’s Program on June 29 during the 2014 ALA Annual Conference in Las Vegas.


 


About OCLC
Founded in 1967, OCLC is a nonprofit, membership, computer library service and research organization dedicated to the public purposes of furthering access to the world’s information and reducing library costs. More than 72,000 libraries in 170 countries have used OCLC services to locate, acquire, catalog, lend, preserve and manage library materials. Researchers, students, faculty, scholars, professional librarians and other information seekers use OCLC services to obtain bibliographic, abstract and full-text information when and where they need it. For more information, visit www.oclc.org.


 


About LITA


LITA is the leading organization reaching out across types of libraries to provide education and services for a broad membership including systems librarians, library administrators, library schools, vendors and many others interested in leading edge technology and applications for librarians and information providers.  For more information, visit www.lita.org, or contact the LITA office by phone, 800-545-2433, ext. 4268; or e-mail: lita@ala.org

Library and Information Technology Association Filed Under: Awards (Professional Recognition) Log in or register to post comments Copyright Statement Privacy Policy Site Help Site Index © 1996–2013 American Library Association 

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Thursday, September 12, 2013

Insight: Research renaissance offers new ways out of depression

Prozac medicine is seen at a pharmacy in Los Angeles, California, in this October 18, 2010 file photo. REUTERS/Lucy Nicholson/Files


1 of 3. Prozac medicine is seen at a pharmacy in Los Angeles, California, in this October 18, 2010 file photo.

Credit: Reuters/Lucy Nicholson/Files

By Kate Kelland, Health and Science Correspondent


LONDON | Mon Sep 9, 2013 6:53am EDT


LONDON (Reuters)- As Susan sits chatting to a nurse in a London clinic, a light tapping sound by her head signals that parts of her brain are being zapped by thousands of tiny electro-magnetic pulses from a machine plugged into the wall.


The 50 year-old doctor is among growing ranks of people with so-called treatment-resistant depression, and after 21 years fighting a disorder that destroyed her ability to work and at times made her want to "opt out of life", this is a last resort.


Until recently, Susan and others like her had effectively reached the end of the road with depression treatments, having tied the best drugs medical science had to offer, engaged in hours of therapy, and tried cocktails of both.


But a renaissance in research into depression prompted by some remarkable results with highly experimental treatments has changed the way neuroscientists see the disorder and is offering hope for patients who had feared there was nowhere left to go.


Their drive to find an answer has taken neuroscientists to uncharted waters - researching everything from psychedelic magic mushrooms, to the veterinary tranquilizer ketamine, to magnetic stimulation through the skull, to using electrical implants - a bit like a pacemaker for the brain - to try and reset this complex organ's wiring and engender a more positive outlook.


Their sometimes surprising findings have in turn taught them more about depression - leading to a view of it not as a single mental illness but a range of disorders each with distinct mechanisms, yet all producing similarly debilitating symptoms.


"The thinking about depression has been revitalized," said Helen Mayberg, a neurologist at Emory University in Atlanta in the United States.


"We have a new model for thinking about psychiatric diseases not just as chemical imbalance - that your brain is a just big vat of soup where you can just add a chemical and stir - but where we ask different questions - what's wrong with brain chemistry and what's wrong with brain circuits."


ADD A CHEMICAL AND STIR?


There's little doubt that until this new breath of hope, depression had been going through a bad patch.


Affecting more than 350 million people, depression is ranked by the World Health Organization as the leading cause of disability worldwide. In extreme cases, depressed people kill themselves. Around a million people commit suicide every year, the majority due to unidentified or untreated depression.


Treatment for depression involves either medication or psychotherapy - and often a combination of both. Yet as things stand, as many as half of patients fail to recover on their first medication, and around a third find no lasting benefit from any medication or talking therapy currently available.


High hopes for "wonder" drugs like Prozac, Seroxat and others in their class of selective serotonin reuptake inhibitors (SSRIs) in the 1980s and 1990s were dimmed by studies in the 2000s that showed they helped a proportion of people, but left at least 30 percent of patients little or no better than before.


And as chronically depressed patients move from trying one drug to the next, or one type of therapy to another, their hopes too dim as it becomes clear that failing to get better with each depressive bout in turn also ups their chances of relapse.


For Susan, the battle seemed never ending.


When she was at her lowest, she dreaded each day, says she was "frightened of everything" and overwhelmed even by straightforward tasks like making a meal for her two children.


"I was taking double doses of antidepressants - two types at once - and because I was also very agitated I was on (the sedative) chloral hydrate to help me sleep," she told Reuters.


"So I was on this massive amount of medication, but with no effect whatsoever on my depression. Nothing was working."


Desperate to help patients like Susan, and alarmed by news of some pharmaceutical firms such as GlaxoSmithKline abandoning research and development in depression because it was proving too hard to find new drugs that could turn a profit, doctors began looking for new approaches.


"We often encounter patients who say 'I've tried a million things and nothing seems to be working'," said Rafael Euba, a consultant psychiatrist at the London Psychiatry Centre (LPC)where Susan was treated. "We want to instill a feeling of hope."


ELECTRO-THERAPY


In Susan's case, past experience with a controversial electrical intervention - electro convulsion therapy (ECT) - which she says was what eventually clawed her back from her severe depression 17 years ago, lead her to investigate the latest in electrical treatments - so-called repetitive transcranial magnetic stimulation, or rTMS


Approved by medicines regulators in the United States and in Europe it is a painless treatment that uses electro-magnetic induction to activate an area of the brain that psychiatrists know is involved in the regulation of mood.


Unlike ECT, which gained notoriety in the 1975 American drama film One Flew Over the Cuckoo's Nest, rTMS it does not induce "shock", but is far more targeted, delivering a pulse to neurons in the brain and that makes them fire again.


At the LPC - currently the only place in Britain where patients can get rTMS - a treatment course can be anything from 3 to 6 weeks of half an hour a day, five days a week.


It isn't cheap. The treatment costs 1,500 pounds ($2,300) per week, with the average course lasting four weeks. And some patients also need weekly or fortnightly "maintenance" sessions beyond that.


Patients put on a white fabric cap and the electro-magnetic coil is positioned over the part of the brain that needs help - normally the left dorso-lateral prefrontal cortex, which is a few inches above the temple beneath the skull.


"Unlike with other psychiatric treatments, patients tend to find this experience quite pleasant," said Euba. "All you get is a slight tingling on the scalp - and some people like that because it's a physical sensation that something is happening."


Although they are from a controlled trial and show only a snapshot of the couple of dozen patients treated and monitored at one clinic, Euba's results so far have been striking.


Of 24 patients with depression ranging from mild to severe who received rTMS at the LPC, 18 of them - or 75 percent - got completely well and were classed as being in remission. Two more responded to treatment but did not get completely well, and only four - 17 percent - did not respond.


DEEP BRAIN STIMULATION


Mayberg and her colleagues in the United States had also been intrigued by the potential for electrical stimulation to ease severe depression, but they went in deeper.


After the success of using deep brain stimulation (DBS) devices made by firms such as Medtronic to treat tremors in patients with Parkinson's disease, her team conducted a trial using them in a small number of patients who'd had depression for decades and had not been helped by numerous different drugs.


Electrical stimulation devices were implanted into the brains of patients with severe depression and bipolar disorder.


"In this treatment the stimulation continues all the time - they implant the "pacemaker" and leave it switched on for years - and only sometimes they have to change the battery," said Jonathan Roiser, a reader in cognitive neuroscience at University College London.


According to study results published in the Archives of General Psychiatry journal last year, the number of patients who had responded to treatment after two years was very high - at 92 percent - and the proportion who were completely well and in remission from their depression was 58 percent.


For psychiatrists more used to seeing patients fail again and again to get better on any kind of treatment, these results were unheard-of. "It was a remarkable finding," says Roiser.


Yet it's not just the brain's wiring that is getting more attention. Chemistry, too has thrown up some exciting results.


Researchers who looked, for example, at the veterinary tranquilizer ketamine - or "Special K" as it is called as a party drug - found that in some patients with depression it dramatically reduced their symptoms, sometimes within hours - and kept their mood stable for several weeks after treatment.


Inspired by these uplifting findings, several drug firms, including Roche, AstraZeneca and Johnson & Johnson's Janssen unit, are in the early or mid stages of developing ketamine derivatives into what they hope will become successful new antidepressants.


DEFINE SUBTYPES AND TREAT ACCORDINGLY


Experts say the success these new and some still experimental treatments for depression emphasizes the re-thinking of it as not one but a cluster of disorders.


"We now have this increasingly influential model of what is causing mental health problems like depression - one focused on the brain circuits," said Roiser.


"We've learnt a lot about how these circuits operate, what kind of cognitive tasks they are involved in, how they interact and how they are connected to each other."


More evidence of this came in a recent study in the Journal of the American Medical Association in which researchers found that brain scans of depressed patients could help predict whether they would be more likely to respond to treatment with anti-depressant drugs or with psychotherapy.


The study focused on a part of the brain known as the insula, which plays a role in influencing emotions.


It found that in patients whose scans showed their insula consumed an excess of glucose, psychotherapy was more likely to help. In patients whose insula were less active, consuming less glucose, antidepressants were more successful.


"Our gut tells us there are subtypes (of depression), and this shows that if you look the brain, you should define the biology and treat accordingly - just as we do in other branches of medicine (like cancer or diabetes)," said Mayberg.


Far from being defeated by the emergence of depression as a more complex a disorder than first assumed, scientists say the renaissance in research is based in confidence that deeper knowledge will ensure new and better treatments can be found.


Roiser confesses to feeling "extremely excited and optimistic" about the future of treating mental illnesses.


"We're in a movement away from the traditional psychological and biological explanations for depression - which look increasingly outdated and simplistic - and we're in the middle of specifying these disorders in terms of their underlying brain circuits," he said. "That's a much better position than we were in 20 years ago."


($1 = 0.6398 British pounds)


(Reporting and writing by Kate Kelland; Editing by Peter Graff)


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Voyager left solar system last year, new research shows

By Irene Klotz

CAPE CANAVERAL, Florida | Thu Aug 15, 2013 8:28pm EDT

CAPE CANAVERAL, Florida (Reuters) - NASA's long-lived Voyager probe crossed into interstellar space last year, becoming the first man-made object to leave the solar system, new research shows.

Scientists have been waiting for Voyager to detect a magnetic field that flows in a different direction than the solar system's magnetic field. But the new research shows that scenario is not accurate.

"We think that the magnetic field within the solar system and in the interstellar are aligned enough that you can actually pass through without seeing a huge change in direction," University of Maryland physicist Marc Swisdak said in an interview with Reuters on Thursday.

That would mean that Voyager actually reached interstellar space last summer when it detected a sudden drop in the number of particles coming from the sun and a corresponding rise in the number of galactic cosmic rays coming from interstellar space.

Not everyone is convinced, however.

Voyager lead scientist Edward Stone, now retired from NASA's Jet Propulsion Laboratory in Pasadena, California, said Swisdak's research is interesting but different computer models are portraying different scenarios to explain the Voyager data.

"We know where Voyager is in terms of distance and we know what it is observing. The challenge is relating that to these complex models of the interaction between the interstellar medium and the heliosphere," Stone said, referring to the bubble of space that falls under the sun's influence.

Stone and other scientists believe Voyager is in a previously unknown region, dubbed a "magnetic highway," that exists between the heliosphere and interstellar space.

Voyager 1 and a sister probe, Voyager 2, were launched in 1977 to study the outer planets. Voyager 1 is now about 120 times farther away from the sun than Earth. Voyager 2 is heading out of the solar system in a different direction.

The probes are powered by the slow decay of radioactive plutonium. Voyager 1 will begin running out of energy for its science instruments in 2020. By 2025, it will be completely out of power.

If Swisdak and colleagues are correct, Voyager 1's magnetic field readings will stay pretty much the same throughout the remainder of its mission.

"If they see a strong shift in the magnetic field, a big jump, then that means that what we've outlined can't be correct," Swisdak said.

"I'm perfectly willing to be proven wrong here and if I were, that would be kind of cool. But it agrees with all the data that we have so far," he added.

More evidence may come when Voyager 2 crosses the solar system's boundary as well.

The research appears in The Astrophysical Journal Letters.

(Editing by Kevin Gray and Bill Trott)


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Thursday, June 20, 2013

[Research Articles] Increased in Vivo Amyloid-{beta}42 Production, Exchange, and Loss in Presenilin Mutation Carriers

Sci Transl Med 12 June 2013:
Vol. 5, Issue 189, p. 189ra77
Sci. Transl. Med. DOI: 10.1126/scitranslmed.3005615 Alzheimer’s Disease Rachel Potter1,*, Bruce W. Patterson2,*, Donald L. Elbert3, Vitaliy Ovod1, Tom Kasten1, Wendy Sigurdson1,4, Kwasi Mawuenyega1, Tyler Blazey4,5, Alison Goate4,6,7, Robert Chott2, Kevin E. Yarasheski2, David M. Holtzman1,4,6, John C. Morris1,4,6, Tammie L. S. Benzinger4,5,8 and Randall J. Bateman1,4,6,†

1Department of Neurology, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, MO 63110, USA.
2Department of Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA.
3Department of Biomedical Engineering, Washington University in St. Louis, One Brookings Drive, St. Louis, MO 63130, USA.
4Knight Alzheimer’s Disease Research Center, Washington University School of Medicine, St. Louis, MO 63110, USA.
5Department of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
6Hope Center for Neurological Disorders, Washington University School of Medicine, St. Louis, MO 63110, USA.
7Department of Psychiatry, Washington University School of Medicine, St. Louis, MO 63110, USA.
8Department of Neurological Surgery, Washington University School of Medicine, St. Louis, MO 63110, USA. ?†Corresponding author. E-mail: batemanr{at}wustl.edu?* These authors contributed equally to this work.

Alzheimer’s disease (AD) is hypothesized to be caused by an overproduction or reduced clearance of amyloid-ß (Aß) peptide. Autosomal dominant AD (ADAD) caused by mutations in the presenilin (PSEN) gene have been postulated to result from increased production of Aß42 compared to Aß40 in the central nervous system (CNS). This has been demonstrated in rodent models of ADAD but not in human mutation carriers. We used compartmental modeling of stable isotope labeling kinetic (SILK) studies in human carriers of PSEN mutations and related noncarriers to evaluate the pathophysiological effects of PSEN1 and PSEN2 mutations on the production and turnover of Aß isoforms. We compared these findings by mutation status and amount of fibrillar amyloid deposition as measured by positron emission tomography (PET) using the amyloid tracer Pittsburgh compound B (PIB). CNS Aß42 to Aß40 production rates were 24% higher in mutation carriers compared to noncarriers, and this was independent of fibrillar amyloid deposits quantified by PET PIB imaging. The fractional turnover rate of soluble Aß42 relative to Aß40 was 65% faster in mutation carriers and correlated with amyloid deposition, consistent with increased deposition of Aß42 into plaques, leading to reduced recovery of Aß42 in cerebrospinal fluid (CSF). Reversible exchange of Aß42 peptides with preexisting unlabeled peptide was observed in the presence of plaques. These findings support the hypothesis that Aß42 is overproduced in the CNS of humans with PSEN mutations that cause AD, and demonstrate that soluble Aß42 turnover and exchange processes are altered in the presence of amyloid plaques, causing a reduction in Aß42 concentrations in the CSF.

Copyright © 2013, American Association for the Advancement of ScienceCitation: R. Potter, B. W. Patterson, D. L. Elbert, V. Ovod, T. Kasten, W. Sigurdson, K. Mawuenyega, T. Blazey, A. Goate, R. Chott, K. E. Yarasheski, D. M. Holtzman, J. C. Morris, T. L. S. Benzinger, R. J. Bateman, Increased in Vivo Amyloid-ß42 Production, Exchange, and Loss in Presenilin Mutation Carriers. Sci. Transl. Med. 5, 189ra77 (2013).


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[Research Articles] Therapeutic Targeting of a Robust Non-Oncogene Addiction to PRKDC in ATM-Defective Tumors

Sci Transl Med 12 June 2013:
Vol. 5, Issue 189, p. 189ra78
Sci. Transl. Med. DOI: 10.1126/scitranslmed.3005814 Cancer Arina Riabinska1,*, Mathias Daheim1,*, Grit S. Herter-Sprie1,†, Johannes Winkler2,3, Christian Fritz1,3, Michael Hallek1, Roman K. Thomas3,4,5, Karl-Anton Kreuzer1, Lukas P. Frenzel1,3, Parisa Monfared1, Jorge Martins-Boucas1, Shuhua Chen1,*,‡ and Hans Christian Reinhardt1,3,5,*,‡

1Department of Internal Medicine, University Hospital of Cologne, 50931 Cologne, Germany.
2Institute for Genetics, University of Cologne, 50937 Cologne, Germany.
3Cologne Excellence Cluster on Cellular Stress Response in Aging-Associated Diseases, University of Cologne, 50674 Cologne, Germany.
4Department of Translational Genomics, University of Cologne, 50931 Cologne, Germany.
5Collaborative Research Center 832, Molecular Basis and Modulation of Cellular Interaction in the Tumor Microenvironment, 50937 Cologne, Germany. ?‡Corresponding author. E-mail: christian.reinhardt{at}uk-koeln.de (H.C.R.); shuhua.chen{at}uni-koeln.de (S.C.) ?* These authors contributed equally to this work.

?† Present address: Dana-Farber Cancer Institute, Boston, MA 02215, USA.

When the integrity of the genome is threatened, cells activate a complex, kinase-based signaling network to arrest the cell cycle, initiate DNA repair, or, if the extent of damage is beyond repair capacity, induce apoptotic cell death. The ATM protein lies at the heart of this signaling network, which is collectively referred to as the DNA damage response (DDR). ATM is involved in numerous DDR-regulated cellular responses—cell cycle arrest, DNA repair, and apoptosis. Disabling mutations in the gene encoding ATM occur frequently in various human tumors, including lung cancer and hematological malignancies. We report that ATM deficiency prevents apoptosis in human and murine cancer cells exposed to genotoxic chemotherapy. Using genetic and pharmacological approaches, we demonstrate in vitro and in vivo that ATM-defective cells display strong non-oncogene addiction to DNA-PKcs (DNA-dependent protein kinase catalytic subunit). Further, this dependence of ATM-defective cells on DNA-PKcs offers a window of opportunity for therapeutic intervention: We show that pharmacological or genetic abrogation of DNA-PKcs in ATM-defective cells leads to the accumulation of DNA double-strand breaks and the subsequent CtBP-interacting protein (CtIP)–dependent generation of large single-stranded DNA (ssDNA) repair intermediates. These ssDNA structures trigger proapoptotic signaling through the RPA/ATRIP/ATR/Chk1/p53/Puma axis, ultimately leading to the apoptotic demise of ATM-defective cells exposed to DNA-PKcs inhibitors. Finally, we demonstrate that DNA-PKcs inhibitors are effective as single agents against ATM-defective lymphomas in vivo. Together, our data implicate DNA-PKcs as a drug target for the treatment of ATM-defective malignancies.

Copyright © 2013, American Association for the Advancement of ScienceCitation: A. Riabinska, M. Daheim, G. S. Herter-Sprie, J. Winkler, C. Fritz, M. Hallek, R. K. Thomas, K.-A. Kreuzer, L. P. Frenzel, P. Monfared, J. Martins-Boucas, S. Chen, H. C. Reinhardt, Therapeutic Targeting of a Robust Non-Oncogene Addiction to PRKDC in ATM-Defective Tumors. Sci. Transl. Med. 5, 189ra78 (2013).


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Wednesday, June 19, 2013

[Errata] A Correction to the Research Article Titled: "The Identification and Characterization of Breast Cancer CTCs Competent for Brain Metastasis" by L. Zhang, L. D. Ridgway, M. D. Wetzel, J. Ngo, W. Yin, D. Kumar, J. C. Goodman, M. D. Groves, D. Marchetti

[Research Articles] In Vivo-Directed Evolution of a New Adeno-Associated Virus for Therapeutic Outer Retinal Gene Delivery from the Vitreous

Sci Transl Med 12 June 2013:
Vol. 5, Issue 189, p. 189ra76
Sci. Transl. Med. DOI: 10.1126/scitranslmed.3005708 BLINDNESS Deniz Dalkara1,*, Leah C. Byrne1,*, Ryan R. Klimczak2, Meike Visel2, Lu Yin3, William H. Merigan3, John G. Flannery1,2,† and David V. Schaffer1,2,4,†

1Helen Wills Neuroscience Institute, University of California, Berkeley, CA 94720–1462, USA.
2Department of Molecular and Cellular Biology, University of California, Berkeley, CA 94720–1462, USA.
3Flaum Eye Institute and Center for Visual Science, University of Rochester, Rochester, NY 14642, USA.
4Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94720–1462, USA. ?†Corresponding author. E-mail: schaffer{at}berkeley.edu (D.V.S.); flannery{at}berkeley.edu (J.G.F.) ?* These authors contributed equally to this work.

Inherited retinal degenerative diseases are a clinically promising focus of adeno-associated virus (AAV)–mediated gene therapy. These diseases arise from pathogenic mutations in mRNA transcripts expressed in the eye’s photoreceptor cells or retinal pigment epithelium (RPE), leading to cell death and structural deterioration. Because current gene delivery methods require an injurious subretinal injection to reach the photoreceptors or RPE and transduce just a fraction of the retina, they are suitable only for the treatment of rare degenerative diseases in which retinal structures remain intact. To address the need for broadly applicable gene delivery approaches, we implemented in vivo–directed evolution to engineer AAV variants that deliver the gene cargo to the outer retina after injection into the eye’s easily accessible vitreous humor. This approach has general implications for situations in which dense tissue penetration poses a barrier for gene delivery. A resulting AAV variant mediated widespread delivery to the outer retina and rescued the disease phenotypes of X-linked retinoschisis and Leber’s congenital amaurosis in corresponding mouse models. Furthermore, it enabled transduction of primate photoreceptors from the vitreous, expanding its therapeutic promise.

Copyright © 2013, American Association for the Advancement of ScienceCitation: D. Dalkara, L. C. Byrne, R. R. Klimczak, M. Visel, L. Yin, W. H. Merigan, J. G. Flannery, D. V. Schaffer, In Vivo–Directed Evolution of a New Adeno-Associated Virus for Therapeutic Outer Retinal Gene Delivery from the Vitreous. Sci. Transl. Med. 5, 189ra76 (2013).


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Tuesday, April 23, 2013

2010 JPL Outstanding Postdoctoral Research Awards

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$(document).ready(function(){$('.star-rating').rating({callback: function(value, link){ $.post("../../", {fuseaction: 'starrating.submitrating', starratingid:$("#starratingid").val(), objecttype:$("#objecttype").val(), objectid:$("#objectid").val(),starrating:value}, function(obj) { $('.star-rating').rating('readOnly',true); var newobj = eval('(' + obj + ')'); $('#starratingleftcontainer').html('Average Rating: ' + newobj.ratio + ' / 5 ('+ newobj.ratinghits +' ratings)'); $('#starratingid').val(newobj.starratingid); });}});$("#starratinghelpicon").hover(function() {$("#starratinghelptextcontainer").animate({opacity: "show"}, "slow");}, function() {$("#starratinghelptextcontainer").animate({opacity: "hide"}, "fast");});});Average Rating: 4 / 5 (4 ratings) 2010 JPL Outstanding Postdoctoral Research Awards2010 JPL Outstanding Postdoctoral Research Awards

Winners of the annual 2010 Postdoc Research Day gave seminars on their research and were presented with plaques to commemorate the event.

Ceremonies held in September honored four postdoctoral scholars for their outstanding research efforts at JPL.

The researchers won a competition at the Labs Postdoctoral Research Day, held in August. The day showcased the outstanding work of postdoctoral scholars in the fields of Earth Science, Astrophysics and Space Science, Planetary Science and Life Detection, and Technology, Instrumentation, and Engineering.

The winners delivered lectures on their work at the September 13 awards ceremony and were presented with commemorative plaques by JPL Chief Scientist Dan McCleese.

The four winners were:

Alexey Pankine (Planetary Science and Life Detection) for "Water Vapor Transport During Summer in the Martian Arctic"Carmen Boening (Earth Science) for "Record-High Ocean Bottom Pressure in the South Pacific Observed by GRACE"Jason Young (Astrophysics and Space Science) for "Electron Impact Excitation of Lyman-Birge-Hopfield Band Emissions"Cecile Jung (Technology, Instrumentation, and Engineering) for "Silicon Micromachining Technology for THz Applications"

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NASA Takes to the Air With New 'Earth Venture' Research Projects

JPL's Carbon in Arctic Reservoirs Vulnerability Experiment JPL's Carbon in Arctic Reservoirs Vulnerability Experiment will bridge critical gaps in our knowledge and understanding of Arctic ecosystems, links between the Arctic water and terrestrial carbon cycles, and the effects of fires and thawing permafrost. Image credit: NASA JPL/Kyle McDonald
› Larger view May 27, 2010

PASADENA, Calif. -- Hurricanes, air quality and Arctic ecosystems are among the research areas to be investigated during the next five years by new NASA airborne science missions announced today.

The five competitively-selected proposals, including one from NASA's Jet Propulsion Laboratory, Pasadena, Calif., are the first investigations in the new Venture-class series of low-to-moderate-cost projects established last year.

The Earth Venture missions are part of NASA's Earth System Science Pathfinder program. The small, targeted science investigations complement NASA's larger research missions. In 2007, the National Research Council recommended that NASA undertake these types of regularly solicited, quick-turnaround projects.

This year's selections are all airborne investigations. Future Venture proposals may include small, dedicated spacecraft and instruments flown on other spacecraft.

"I'm thrilled to be able to welcome these new principal investigators into NASA's Earth Venture series," said Edward Weiler, associate administrator of the agency's Science Mission Directorate in Washington. "These missions are considered a 'tier 1' priority in the National Research Council's Earth Science decadal survey. With this selection, NASA moves ahead into this exciting type of scientific endeavor."

The missions will be funded during the next five years at a total cost of not more than $30 million each. The cost includes initial development and deployment through analysis of data. Approximately $10 million was provided through the American Recovery and Reinvestment Act toward the maximum $150 million funding ceiling for the missions.

Six NASA centers, 22 educational institutions, nine U.S. or international government agencies and three industrial partners are involved in these missions. The five missions were selected from 35 proposals.

The selected missions are:

1. Carbon in Arctic Reservoirs Vulnerability Experiment. Principal Investigator Charles Miller, NASA's Jet Propulsion Laboratory in Pasadena, Calif.

The release and absorption of carbon from Arctic ecosystems and its response to climate change are not well known because of a lack of detailed measurements. This investigation will collect an integrated set of data that will provide unprecedented experimental insights into Arctic carbon cycling, especially the release of important greenhouse gases such as carbon dioxide and methane. Instruments will be flown on a Twin Otter aircraft to produce the first simultaneous measurements of surface characteristics that control carbon emissions and key atmospheric gases.

2. Airborne Microwave Observatory of Subcanopy and Subsurface. Principal Investigator Mahta Moghaddam, University of Michigan

North American ecosystems are critical components of the global exchange of the greenhouse gas carbon dioxide and other gases within the atmosphere. To better understand the size of this exchange on a continental scale, this investigation addresses the uncertainties in existing estimates by measuring soil moisture in the root zone of representative regions of major North American ecosystems. Investigators will use NASA's Gulfstream-III aircraft to fly synthetic aperture radar that can penetrate vegetation and soil to depths of several feet.

3. Airborne Tropical Tropopause Experiment. Principal Investigator Eric Jensen, NASA's Ames Research Center in Moffett Field, Calif.

Water vapor in the stratosphere has a large impact on Earth's climate, the ozone layer and how much solar energy Earth retains. To improve our understanding of the processes that control the flow of atmospheric gases into this region, investigators will launch four airborne campaigns with NASA's Global Hawk remotely piloted aerial systems. The flights will study chemical and physical processes at different times of year from bases in California, Guam, Hawaii and Australia.

4. Deriving Information on Surface Conditions from Column and Vertically Resolved Observations Relevant to Air Quality. Principal Investigator James Crawford, NASA's Langley Research Center in Hampton, Va.

Satellites can measure air quality factors like aerosols and ozone-producing gases in an entire column of atmosphere below the spacecraft, but distinguishing the concentrations at the level where people live is a challenge. This investigation will provide integrated data of airborne, surface and satellite observations, taken at the same time, to study air quality as it evolves throughout the day. NASA's B-200 and P-3B research aircraft will fly together to sample a column of the atmosphere over instrumented ground stations.

5. Hurricane and Severe Storm Sentinel. Principal Investigator Scott Braun, NASA's Goddard Space Flight Center in Greenbelt, Md.

The prediction of the intensity of hurricanes is not as reliable as predictions of the location of hurricane landfall, in large part because of our poor understanding of the processes involved in intensity change. This investigation focuses on studying hurricanes in the Atlantic Ocean basin using two NASA Global Hawks flying high above the storms for up to 30 hours. The Hawks will deploy from NASA's Wallops Flight Facility in Virginia during the 2012 to 2014 Atlantic hurricane seasons.

"These new investigations, in concert with NASA's Earth-observing satellite capabilities, will provide unique new data sets that identify and characterize important phenomena, detect changes in the Earth system and lead to improvements in computer modeling of the Earth system," said Jack Kaye, associate director for research of NASA's Earth Science Division in the Science Mission Directorate.

Langley manages the Earth System Pathfinder program for the Science Mission Directorate. The missions in this program provide an innovative approach to address Earth science research with periodic windows of opportunity to accommodate new scientific priorities.

For information about NASA and agency programs, visit: http://www.nasa.gov .

JPL is managed for NASA by the California Institute of Technology in Pasadena.

Media contact:
Alan Buis 818-354-0474
Jet Propulsion Laboratory, Pasadena, Calif.
Alan.buis@jpl.nasa.gov

Steve Cole 202-358-0918
NASA Headquarters, Washington
Stephen.e.cole@nasa.gov

2010-182


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NASA Awards Space Technology Research Fellowship Grants

RELEASE : 11-246 NASA Awards Space Technology Research Fellowship Grants WASHINGTON -- NASA has selected the inaugural class of Space Technology Research Fellows. Eighty-one students will receive graduate student fellowships from NASA's Office of the Chief Technologist to pursue master's or doctoral degrees in relevant space technology disciplines at their respective institutions.

This first class of Space Technology Fellows is part of NASA's strategy to develop the technological foundation for its future science and exploration missions. The program's goal is to provide the nation with a pipeline of highly skilled engineers and technologists to improve U.S. competitiveness.

"These fellowships will develop America's technology leaders for tomorrow, leaders that will help us out-innovate, out-educate and out-build our competitors and maintain our leadership in space," NASA Administrator Charles Bolden said. "President Obama has said, 'America's competitiveness rests on the excellence of our citizens in technical fields.' These grants are an investment in America's intellectual capital and our nation's future."

NASA Space Technology Fellows will perform innovative space technology research while building the skills necessary to become future technological leaders. Selected candidates will perform graduate student research on their respective campuses and at NASA centers and nonprofit U.S. research and development laboratories.

For a list of fellowship recipients, their research institutions and their research topics, visit: http://go.usa.gov/BfN


The fellowships program is managed for NASA's Office of the Chief Technologist by the agency's Glenn Research Center in Cleveland. For information about the Office of the Chief Technologist and the fellowships program, visit: http://www.nasa.gov/oct  

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Thursday, April 11, 2013

[Research Article] Annually Resolved Ice Core Records of Tropical Climate Variability Over the Past ~1800 Years

L. G. Thompson1,2,*, E. Mosley-Thompson1,3, M. E. Davis1, V. S. Zagorodnov1, I. M. Howat1,2, V. N. Mikhalenko4, P.-N. Lin1

1Byrd Polar Research Center, The Ohio State University, Columbus, OH 43210, USA.
2School of Earth Sciences, The Ohio State University, Columbus, OH 43210, USA.
3Department of Geography, The Ohio State University, Columbus, OH 43210, USA.
4Institute of Geography, Russian Academy of Sciences, Moscow, Russia. ?*Corresponding author. E-mail: thompson.3{at}osu.eduIce cores from low latitudes can provide a wealth of unique information about past climate in the tropics, but they are difficult to recover and few exist. Here, we report annually resolved ice core records from the Quelccaya ice cap (5670 masl) in Peru which extend back ~1800 years and provide a high-resolution record of climate variability there. Oxygen isotopic ratios (d18O) are linked to sea-surface temperatures in the tropical eastern Pacific, while concentrations of ammonium and nitrate document the dominant role played by the migration of the Intertropical Convergence Zone in the region of the tropical Andes. Quelccaya continues to retreat and thin: Radiocarbon dates on wetland plants exposed along its retreating margins indicate it has not been smaller for at least six millennia.

Received for publication 18 December 2012. Accepted for publication 21 March 2013.


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[Research Articles] Amyloid Fibrils Composed of Hexameric Peptides Attenuate Neuroinflammation

Sci Transl Med 3 April 2013:
Vol. 5, Issue 179, p. 179ra42
Sci. Transl. Med. DOI: 10.1126/scitranslmed.3005681 Multiple Sclerosis Michael P. Kurnellas1, Chris M. Adams2, Raymond A. Sobel3, Lawrence Steinman1,* and Jonathan B. Rothbard1,4

1Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, CA 94305–5316, USA.
2Stanford University Mass Spectrometry, Stanford University School of Medicine, Stanford, CA 94305–5316, USA.
3Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305–5316, USA.
4Division of Immunology and Rheumatology, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305–5316, USA. ?*Corresponding author. E-mail: steinman{at}stanford.eduThe amyloid-forming proteins tau, aB crystallin, and amyloid P protein are all found in lesions of multiple sclerosis (MS). Our previous work established that amyloidogenic peptides from the small heat shock protein aB crystallin (HspB5) and from amyloid ß fibrils, characteristic of Alzheimer’s disease, were therapeutic in experimental autoimmune encephalomyelitis (EAE), reflecting aspects of the pathology of MS. To understand the molecular basis for the therapeutic effect, we showed a set of amyloidogenic peptides composed of six amino acids, including those from tau, amyloid ß A4, major prion protein (PrP), HspB5, amylin, serum amyloid P, and insulin B chain, to be anti-inflammatory and capable of reducing serological levels of interleukin-6 and attenuating paralysis in EAE. The chaperone function of the fibrils correlates with the therapeutic outcome. Fibrils composed of tau 623–628 precipitated 49 plasma proteins, including apolipoprotein B-100, clusterin, transthyretin, and complement C3, supporting the hypothesis that the fibrils are active biological agents. Amyloid fibrils thus may provide benefit in MS and other neuroinflammatory disorders.

Copyright © 2013, American Association for the Advancement of ScienceCitation: M. P. Kurnellas, C. M. Adams, R. A. Sobel, L. Steinman, J. B. Rothbard, Amyloid Fibrils Composed of Hexameric Peptides Attenuate Neuroinflammation. Sci. Transl. Med. 5, 179ra42 (2013).


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Research holds revelations about an ancient society's water conservation, purification


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Wednesday, April 10, 2013

Research links geochemistry, medicine

Groundbreaking work that straddles the fence between geochemistry and medicine was the subject of a recent article appearing on AZCentral. The March 6 article, written by Dianna M. Náñez, examined the research of a team of ASU researchers pioneering a new technique that could detect certain cancers earlier.

Ariel Anbar, a professor in the School of Earth and Space Exploration and the Department of Chemistry & Biochemistry in ASU's College of Liberal Arts & Sciences, has been working to refine a technique that would measure calcium isotopes in blood and urine samples.

Bone loss occurs in a number of cancers in their advanced stages. By the time these changes can be detected by X-rays, as a loss of bone density, significant damage already has occurred.

With the new technique, bone loss is detected by carefully analyzing the isotopes of the chemical element calcium that are naturally present in urine.

"The hope is to establish a biomarker that would detect the spread of breast cancer to bone tissue earlier, detect a precursor condition tied to bone-density loss in patients that may develop multiple myeloma and assess whether cancer and bone-loss treatments are working," Náñez writes.

Melanie Channon, a Bisgrove Scholar recipient, joined Anbar's team as a postdoctoral research assistant. Her award funding will allow her to dedicate the next two years to cancer research.

Anbar and Channon's research piqued the interest of Mayo Clinic doctors who have provided blood and urine samples from their cancer patients.

More information: www.azcentral.com/community/tempe/articles/20130304asu-research-links-geochemistry-medicine.html

Provided by Arizona State University search and more info website


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